CDS

Accession Number TCMCG006C80119
gbkey CDS
Protein Id XP_013693581.1
Location join(1237927..1238103,1238182..1238241,1238748..1238995,1239078..1239238,1239339..1239397,1239491..1239537,1239602..1239745,1239813..1239901,1240398..1240963)
Gene LOC106397532
GeneID 106397532
Organism Brassica napus

Protein

Length 516aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA293435
db_source XM_013838127.2
Definition LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase XBAT33 [Brassica napus]

EGGNOG-MAPPER Annotation

COG_category O
Description E3 ubiquitin-protein ligase
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
ko04121        [VIEW IN KEGG]
KEGG_ko ko:K19044        [VIEW IN KEGG]
EC 2.3.2.27        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway -
GOs GO:0003674        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0004842        [VIEW IN EMBL-EBI]
GO:0006464        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0016567        [VIEW IN EMBL-EBI]
GO:0016740        [VIEW IN EMBL-EBI]
GO:0019538        [VIEW IN EMBL-EBI]
GO:0019787        [VIEW IN EMBL-EBI]
GO:0032446        [VIEW IN EMBL-EBI]
GO:0036211        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043412        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044267        [VIEW IN EMBL-EBI]
GO:0070647        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0140096        [VIEW IN EMBL-EBI]
GO:1901564        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGGAAACTCGTTTGGTTGTTCGGCGTCCGGCGAGAGATTGGTATCGGCGGCGAGAGATGGCGATTACGTGGAAGCGAAGATGCTGCTCGATTGCAATCCTTGCCTCGCAAAGTACTCTACCTTCGGCGGTCTCAATTCTCCGTTGCATTTCGCAGCCGCTAAAGGCCATAACGAGATCGTTGGGTTGCTGCTAGAGAACGGAGCTGATGTGAATTCCAGAAACTATTGCGGCCAGACAGCATTGTTTAAAGTTTAAACAAAACTATCTTCTTTGAATCAGATTTTTATTTTTTAAACATTTTTATTTTTGCTGAAGGTTACAAGAGCTGATTATTTAGCAGGAAGAACAGCGCTTCATTTCGCTGCTGTGAATGGTCACGCCAGGTGTATTAGACTCGTCTTGGCTGACTTTGTACCTAGTCAGAAACTAAACCCTCTTCCTCAGACTGGTGTGATCACACCGAGGAACAAATCCCAGCAAAGCGCATTGTCTAAATTTGTGAACAAAGCGGCTGACGGTGGAATCACAGCTCTTCACATGGCTGCTTTAAACGGATTGTTTGACTGTGTTCAGCTTTTGCTTGATCTTGAAGCTAATGTTTCCGCTGTGACGTTTCATTATGGAACAACAATGGATATGATTGGAGCAGGAAGCACACCTTTGCACTATGCCGCTTGTGGTGGGAATCTAAAATGTTGTCAGATTCTCCTTTCAAGAGGTGCAAGCAAGATGACATTGAACTGCAATGGATGGCTGCCAATAGACATAGCACGGATGTGGAGTCGTCATTGGTTAGAACCGTTGCTTTCACCAGACTCTGATGTCGTCATTCCAAGCTTCCCTCATTCAAATTACTTATCTTTGCCACTTTTGAGTATACTCAACATCGCAAGAGAGTTCGGGTTGCAGTCTGCAACCATCACAGATGAGGTTGATATCTGTGCGGTTTGCCTGGAAAGAACATGCACTGTTGCTGCTGAAGGTTGTGACCATCAGCTATGTGTGAGATGCGCGTTATACCTTTGCTCATCAAGCAATGTTCCCTCAGTGACAGTAGATCCACCCGGTTCAATCCCTTGTCCTCTCTGCAGACACGGAATAGTGTCCTTTAAACGTCTCCCAAGCTCCCTGACCAAAGAAACGAAGTTACCTATGTCACTCGGGTTATGTGCGCCGTGTATGCTTCACACAAGCGACGCAACAGATCAATCTTCACCGACAACAGAACAGCAACAGCGTAGTAGCAAGACTCGGACATCCTCGGTTTCGTCTGATATGTTCTGTCCTGTAACATGTAGCCCATTCCCTTCGGTTAATATACCAATGTGCACATGCAACGATGGAACGTGTCCGAACTTTGAGACGCATGGAACAGAGAGACATAGTGAAGAAGATGACGAGTCTTCTTCGCCTCCTCGGGGGACGAGTGAGCAGGAGAAGATAGGAGAAGGGCAAAGACTTGGGAAGGCAACAACTTGTTCAAGCATGTTCTGGGGGAGAAGAAGCTGTAGCAGAGAGAACCAGTGCAACGCTGAGATCAATGCCTGA
Protein:  
MGNSFGCSASGERLVSAARDGDYVEAKMLLDCNPCLAKYSTFGGLNSPLHFAAAKGHNEIVGLLLENGADVNSRNYCGQTALFKVXTKLSSLNQIFIFXTFLFLLKVTRADYLAGRTALHFAAVNGHARCIRLVLADFVPSQKLNPLPQTGVITPRNKSQQSALSKFVNKAADGGITALHMAALNGLFDCVQLLLDLEANVSAVTFHYGTTMDMIGAGSTPLHYAACGGNLKCCQILLSRGASKMTLNCNGWLPIDIARMWSRHWLEPLLSPDSDVVIPSFPHSNYLSLPLLSILNIAREFGLQSATITDEVDICAVCLERTCTVAAEGCDHQLCVRCALYLCSSSNVPSVTVDPPGSIPCPLCRHGIVSFKRLPSSLTKETKLPMSLGLCAPCMLHTSDATDQSSPTTEQQQRSSKTRTSSVSSDMFCPVTCSPFPSVNIPMCTCNDGTCPNFETHGTERHSEEDDESSSPPRGTSEQEKIGEGQRLGKATTCSSMFWGRRSCSRENQCNAEINA